Metals in Tortula muralis from sandstone buildings in an urban agglomeration

Acrocarpous mosses present on stonewalls in urban areas may be used for monitoring purposes. Therefore for this investigation we selected Tortula muralis expecting that this species with an ability to colonise buildings in polluted agglomerations where other species have vanished may provide important information to monitor environmental quality. Concentrations of Cd, Co, Cr, Cu, Fe, Mn, Ni, Pb, V and Zn in T. muralis, in dust deposited on sandstone surfaces, and in the sandstones on which the moss grew were measured. T. muralis appeared to be a good bioindicator of airborne pollution which accumulated especially extremely high Cu, Fe and Zn concentrations reaching values much higher than harmful for plants. There was no relation between metal concentrations in underlying sandstones and T. ruralis. There was a relation between metal concentrations in dust and T. muralis. Cd, Co, Cr, Mn and V concentrations in T. muralis were higher than in dust. The Self-Organizing Feature Map identifying groups of sampling sites with similar concentrations of metals in mosses was able to classify the pollution level by distinguishing groups of highly, medium and less polluted sites. Once trained, SOFM can be applied in ecological investigations and could form a future basis for recognizing e.g. the type of pollution in urban environments by analysing the concentrations of elements in T. muralis.     

Indicator species for avian biodiversity hotspots: Combination of specialists and generalists is necessary in less natural environments

In this work, I tested the premise that the distribution of a group of few common bird species can be used to predict bird species hotspots in Central Italy. The data on bird observations were collected on 530 sampled sites (150 in cultivated, 150 in forest, 150 in grassland and 80 in urban and peri-urban environments). In each environment, sampled sites with values of bird species richness in the upper than third quartile were classified as high species richness spots (HSRS), while sites with lower bird species richness were classified as non-HSRS (binary classification system).Generalized Linear Models (GLM) were applied using HSRS or non-HSRS as binomial response variable and bird species occurrence was used as the predictor variable. All selected models showed “fair” or “good” capacities to predict the avian hotspots, using only few common birds (4–6) species. However, bird species selected as predictors were different on each environment. In more natural environments (grassland, forest), specialist species were selected, while in most disturbed environments (cultivated and urban) both generalist and specialist species were selected. The results are in agreement with other studies which show how homogenization of bird communities is strongly correlated to landscape disturbance. The findings supports the hypothesis that indicators have to incorporate both specialists and generalist’s species simultaneously. Furthermore, the groups of birds selected as surrogates are easy to detect and this makes it possible to involve citizen-science programmes in obtain data. This approach can be a cheap and efficient and can help to significantly speed up the process of assessing ecosystems that might be under threat.     

Relative suitability of the common pistachio psyllid,Agonoscena pistaciae (Hemiptera: Aphalaridae), as prey for the two-spotted ladybird,Adalia bipunctata (Coleoptera: Coccinellidae)

The suitability of Agonoscena pistaciae Burckhardt & Lauterer as a prey for Adalia bipunctata (Linnaeus) was evaluated by studying the predator’s development and reproduction on this species in comparison to reference diets of nymphs of Myzus persicae (Sulzer) and eggs of Ephestia kuehniella Zeller. Both larval and adult A. bipunctata fed voraciously on A. pistaciae. The development time of the ladybird was shorter when fed on M. persicae and A. pistaciae and longer on E. kuehniella. The survival rate was 87% on M. persicae and 85% on A. pistaciae, both significantly greater than on E. kuehniella eggs (63%). The ladybirds were heaviest at eclosion and their fecundity was higher on M. persicae than on A. pistaciae or E. kuehniella. Both the aphid and psyllid diets yielded higher R₀, r_m values and lower T and DT values than E. kuehniella eggs. Based on total development time, immature survival and adult fecundity, the relative suitability for A. bipunctata was M. persicae > A. pistaciae > E. kuehniella. When ladybirds were reared on psyllids, they showed no preference between aphid or psyllid diets, but when raised on M. persicae, they preferred an aphid diet. A field experiment showed that A. bipunctata preferred to oviposit on pistachio trees at a height of 150–200 cm, i.e. towards the top. The results indicate that A. pistaciae constitutes a complete food for A. bipunctata, supporting both completed development and successful reproduction.     

京津唐城市群土地利用变化的区域增温效应模拟

土地利用变化与大气相互作用,影响区域气候,而城市及其周边地区受人类活动影响很大,成为土地利用变化最为强烈的区域。利用耦合了城市冠层模型的中尺度大气模式(WRF/UCM),在2008年的初始大气条件和边界条件下,用20世纪70年代后期和2008年两期京津唐地区土地利用资料替换WRF/UCM模式推荐的地表覆盖数据,模拟分析不同土地利用类型及其变化对应的气候差异情况。在此过程中,利用插值方法(ANUSPLIN)得到京津唐及其周边26个气象站点观测气温的插值数据,并以此在时空尺度上对比验证了模式的模拟结果。结果表明:WRF/UCM较好地模拟出了近地表2 m的气温,无论在空间上还是在时间上都表现良好;由城市扩展主导的土地利用变化导致研究区大部分区域的增温幅度大于0.05℃,且最大的增温区域出现在城市扩展区,可达1.31℃。此外本研究初步探讨了土地利用变化的增温贡献率,结果显示研究区土地利用变化导致增温0.08℃,整体贡献率为9.88%,城市扩展区增温0.29℃,表示出了城市扩展导致的增温贡献率达到32.75%。     

Socio-economic and ecological impacts of global protected area expansion plans

Several global strategies for protected area (PA) expansion have been proposed to achieve the Convention on Biological Diversity''s Aichi target 11 as a means to stem biodiversity loss, as required by the Aichi target 12. However, habitat loss outside PAs will continue to affect habitats and species, and PAs may displace human activities into areas that might be even more important for species persistence. Here we measure the expected contribution of PA expansion strategies to Aichi target 12 by estimating the extent of suitable habitat available for all terrestrial mammals, with and without additional protection (the latter giving the counterfactual outcome), under different socio-economic scenarios and consequent land-use change to 2020. We found that expanding PAs to achieve representation targets for ecoregions under a Business-as-usual socio-economic scenario will result in a worse prognosis than doing nothing for more than 50% of the world''s terrestrial mammals. By contrast, targeting protection towards threatened species can increase the suitable habitat available to over 60% of terrestrial mammals. Even in the absence of additional protection, an alternative socio-economic scenario, adopting progressive changes in human consumption, leads to positive outcomes for mammals globally and to the largest improvements for wide-ranging species.     

On the serial homology of the pectoral and pelvic girdles of tetrapods

While fore‐ and hindlimbs are commonly assumed to be serially homologous, the serial homology of the pectoral and pelvic girdles is more ambiguous. We investigate the degree to which a common history, developmental program, and gene network are shared between the girdles relative to the rest of the appendicular skeleton. Paleontological data indicate that pectoral appendages arose millions of years before pelvic appendages. Recent embryological and genetic data suggest that the anatomical similarity between the fore‐ and hindlimbs arose through the sequential, derived deployment of similar developmental programs and gene networks, and is therefore not due to ancestral serial homology. Much less developmental work has however been published about the girdles. Here, we provide the first detailed review of the developmental programs and gene networks of the pectoral and pelvic girdles. Our review shows that, with respect to these programs and networks, there are fewer similarities between pelvic and pectoral girdles than there are between the limbs. The available data therefore support recent hypotheses that the anatomical similarities between the fore‐ and hindlimbs arose during the fin‐to‐limb transition through the derived co‐option of similar developmental mechanisms, while the phylogenetically older pectoral and pelvic girdles have remained more distinct since their evolutionary origin.     

Flies without Trehalose

Living organisms adapt to environmental changes through metabolic homeostasis. Sugars are used primarily for the metabolic production of ATP energy and carbon sources. Trehalose is a nonreducing disaccharide that is present in many organisms. In insects, the principal hemolymph sugar is trehalose instead of glucose. As in mammals, hemolymph sugar levels in Drosophila are regulated by the action of endocrine hormones. Therefore, the mobilization of trehalose to glucose is thought to be critical for metabolic homeostasis. However, the physiological role of trehalose as a hemolymph sugar during insect development remains largely unclear. Here, we demonstrate that mutants of the trehalose-synthesizing enzyme Tps1 failed to produce trehalose as expected but survived into the late pupal period and died before eclosion. Larvae without trehalose grew normally, with a slight reduction in body size, under normal food conditions. However, these larvae were extremely sensitive to starvation, possibly due to a local defect in the central nervous system. Furthermore, Tps1 mutant larvae failed to grow on a low-sugar diet and exhibited severe growth defects on a low-protein diet. These diet-dependent phenotypes of Tps1 mutants demonstrate the critical role of trehalose during development in Drosophila and reveal how animals adapt to changes in nutrient availability.     

The Atomic Structure of the HIV-1 gp41 Transmembrane Domain and Its Connection to the Immunogenic Membrane-proximal External Region

The membrane-proximal external region (MPER) C-terminal segment and the transmembrane domain (TMD) of gp41 are involved in HIV-1 envelope glycoprotein-mediated fusion and modulation of immune responses during viral infection. However, the atomic structure of this functional region remains unsolved. Here, based on the high resolution NMR data obtained for peptides spanning the C-terminal segment of MPER and the TMD, we report two main findings: (i) the conformational variability of the TMD helix at a membrane-buried position; and (ii) the existence of an uninterrupted α-helix spanning MPER and the N-terminal region of the TMD. Thus, our structural data provide evidence for the bipartite organization of TMD predicted by previous molecular dynamics simulations and functional studies, but they do not support the breaking of the helix at Lys-683, as was suggested by some models to mark the initiation of the TMD anchor. Antibody binding energetics examined with isothermal titration calorimetry and humoral responses elicited in rabbits by peptide-based vaccines further support the relevance of a continuous MPER-TMD helix for immune recognition. We conclude that the transmembrane anchor of HIV-1 envelope is composed of two distinct subdomains: 1) an immunogenic helix at the N terminus also involved in promoting membrane fusion; and 2) an immunosuppressive helix at the C terminus, which might also contribute to the late stages of the fusion process. The unprecedented high resolution structural data reported here may guide future vaccine and inhibitor developments.     

Carbon monoxide modulates cytochrome oxidase activity and oxidative stress in the developing murine brain during isoflurane exposure

Commonly used anesthetics induce widespread neuronal degeneration in the developing mammalian brain via the oxidative-stress-associated mitochondrial apoptosis pathway. Dysregulation of cytochrome oxidase (CcOX), the terminal oxidase of the electron transport chain, can result in reactive oxygen species (ROS) formation. Isoflurane has previously been shown to activate this enzyme. Carbon monoxide (CO), as a modulator of CcOX, is of interest because infants and children are routinely exposed to CO during low-flow anesthesia. We have recently demonstrated that low concentrations of CO limit and prevent isoflurane-induced neurotoxicity in the forebrains of newborn mice in a dose-dependent manner. However, the effect of CO on CcOX in the context of anesthetic-induced oxidative stress is unknown. Seven-day-old male CD-1 mice underwent 1 h exposure to 0 (air), 5, or 100 ppm CO in air with or without isoflurane. Exposure to isoflurane or CO independently increased CcOX kinetic activity and increased ROS within forebrain mitochondria. However, exposure to CO combined with isoflurane paradoxically limited CcOX activation and oxidative stress. There were no changes seen in steady-state levels of CcOX I protein, indicating post-translational modification of CcOX as an etiology for changes in enzyme activity. CO exposure led to differential effects on CcOX subunit I tyrosine phosphorylation depending on concentration, while combined exposure to isoflurane with CO markedly increased the enzyme phosphorylation state. Phosphorylation of tyrosine 304 of CcOX subunit I has been shown to result in strong enzyme inhibition, and the relative reduction in CcOX kinetics following exposure to CO combined with isoflurane may have been due, in part, to such phosphorylation. Taken together, the data suggest that CO modulates CcOX in the developing brain during isoflurane exposure, thereby limiting oxidative stress. These CO-mediated effects could have implications for the development of low-flow anesthesia in infants and children to prevent anesthesia-induced oxidative stress.